Basic Information
Locus ID:
TC01G2119
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
(NAC) domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 82468622 | 82471673 | + | TC01G2119 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 49,434.26 Da | 47.07 | 65.43 | -0.86 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 56 | 194 | 1.7E-17 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 40 | 213 | 1.83E-34 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 64 | 218 | 4.5E-26 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 55 | 213 | 27.734537 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 242 | 266 | - | - |
| Coils | Coil | Coil | 215 | 235 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_052187392.1 | SUPPRESSOR OF GAMMA RESPONSE 1 isoform X2 [Diospyros lotus] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | I6YDR8 | NAC domain-containing protein OS=Tamarix hispida OX=189793 GN=NAC9 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology