Basic Information
Locus ID:
TC01G1514
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Short Name:
EBF2
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 63070205 | 63073173 | - | TC01G1514 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 71,066.19 Da | 37.59 | 102.73 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 398 | 421 | 1.5 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 611 | 630 | 0.5 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 292 | 315 | 1.0 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 240 | 263 | 0.1 | IPR001611 |
| Pfam | PF12937 | F-box-like | 101 | 135 | 1.2E-5 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 373 | 394 | 0.19 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 585 | 602 | 1.1 | IPR001611 |
| SUPERFAMILY | SSF81383 | F-box domain | 97 | 136 | 2.22E-7 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 200 | 440 | 1.41E-40 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 320 | 668 | 1.8E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 471 | 669 | 7.3E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 280 | 469 | 1.5E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 166 | 279 | 7.5E-24 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 95 | 135 | 3.3E-5 | - |
| SMART | SM00367 | LRR_CC_2 | 424 | 449 | 220.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 214 | 239 | 0.022 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 398 | 423 | 1.1E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 584 | 608 | 2.3 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 240 | 265 | 1.1E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 531 | 556 | 92.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 558 | 583 | 0.36 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 611 | 636 | 16.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 292 | 317 | 2.2E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 266 | 291 | 5.9E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 478 | 503 | 9.1 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 504 | 529 | 0.0054 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 372 | 397 | 6.7E-4 | IPR006553 |
| PRINTS | PR00364 | Disease resistance protein signature | 179 | 194 | 7.4E-6 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 609 | 625 | 7.4E-6 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_050268432.1 | EIN3-binding F-box protein 1 [Quercus robur] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7N2KUF4 | F-box domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology