Basic Information
Locus ID:
TC01G1259
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 52508851 | 52518733 | + | TC01G1259 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.69 | 61,887.74 Da | 48.91 | 90.07 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12122 | AMPKA_C | 416 | 539 | 2.33094E-42 | - |
| CDD | cd14079 | STKc_AMPK_alpha | 45 | 298 | 0.0 | - |
| CDD | cd14335 | UBA_SnRK1_plant | 320 | 360 | 1.44895E-19 | - |
| Pfam | PF00069 | Protein kinase domain | 46 | 298 | 2.1E-80 | IPR000719 |
| Pfam | PF02149 | Kinase associated domain 1 | 499 | 541 | 9.1E-13 | IPR001772 |
| Pfam | PF00627 | UBA/TS-N domain | 320 | 356 | 8.5E-9 | IPR015940 |
| SUPERFAMILY | SSF103243 | KA1-like | 355 | 541 | 1.57E-43 | IPR028375 |
| SUPERFAMILY | SSF46934 | UBA-like | 309 | 357 | 2.36E-5 | IPR009060 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 43 | 313 | 4.05E-99 | IPR011009 |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 422 | 540 | 1.7E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 38 | 381 | 5.2E-113 | - |
| SMART | SM00220 | serkin_6 | 46 | 298 | 8.7E-112 | IPR000719 |
| SMART | SM00165 | uba_6 | 321 | 358 | 1.9E-7 | IPR015940 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 319 | 359 | 14.812021 | IPR015940 |
| ProSiteProfiles | PS50032 | Kinase associated domain 1 (KA1) profile. | 493 | 541 | 15.975291 | IPR001772 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 46 | 298 | 54.703541 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 165 | 177 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 52 | 75 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01090.2 | SNF1 kinase homolog 10. encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase | 0 |
| RefSeq | XP_006482646.1 | SNF1-related protein kinase catalytic subunit alpha KIN10 [Citrus sinensis] | 0 |
| Q38997 | SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana OX=3702 GN=KIN10 PE=1 SV=3 | 0 | |
| TrEMBL | A0A5C7HKV6 | non-specific serine/threonine protein kinase OS=Acer yangbiense OX=1000413 GN=EZV62_015430 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 5 | jg13809, jg18577, jg19776, jg30539, jg4187 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_2535 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah031949 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_1g015250 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg17697, Sbi_jg62370 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg939 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00007289 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl23988, Sgl29167, Sgl33024 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000013557, gene:ENSEOMG00000018638 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.2AG0002010, CQ.Regalona.r1.2BG0003100 |
| Anacardiaceae | Pistacia vera | 4 | pistato.v30193770, pistato.v30193800, pistato.v30194300 ... |
| Apiaceae | Apium graveolens | 3 | Ag3G01464, Ag4G00939, Ag5G00074 |
| Arecaceae | Cocos nucifera | 3 | COCNU_06G000310, COCNU_08G009320, COCNU_16G000900 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103722912, gene-LOC103723553, gene-LOC120112840 |
| Asparagaceae | Asparagus officinalis | 5 | AsparagusV1_01.1024.V1.1, AsparagusV1_07.1056.V1.1 ... |
| Asteraceae | Flaveria trinervia | 4 | Ftri10G00087, Ftri13G11900, Ftri16G33778, Ftri18G11191 |
| Brassicaceae | Arabidopsis thaliana | 3 | AT3G01090.2, AT3G29160.1, AT5G39440.1 |
| Brassicaceae | Eutrema salsugineum | 3 | Thhalv10004026m.g.v1.0, Thhalv10020553m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 3 | Sp2g17770.v2.2, Sp3g01020.v2.2, Sp7g02540.v2.2 |
| Brassicaceae | Brassica nigra | 5 | BniB01g028200.2N, BniB01g060870.2N, BniB02g068630.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G0348 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl08G0286, Cgl08G0302 |
| Cymodoceaceae | Cymodocea nodosa | 3 | gene.Cymno02g10080, gene.Cymno03g05070, gene.Cymno14g02210 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0281s00020.v1.0, Dusal.0906s00003.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate08g02850 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-2213 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG02.235 |
| Plantaginaceae | Plantago ovata | 5 | Pov_00000089, Pov_00023516, Pov_00023585, Pov_00027415 ... |
| Plumbaginaceae | Limonium bicolor | 3 | Lb4G23487, Lb4G25739, Lb5G26937 |
| Poaceae | Echinochloa crus-galli | 9 | AH01.4003, AH02.3054, AH05.1635, BH01.4391, BH02.3136 ... |
| Poaceae | Eleusine coracana subsp. coracana | 6 | gene-QOZ80_1AG0031940, gene-QOZ80_1BG0082150 ... |
| Poaceae | Hordeum vulgare | 8 | HORVU.MOREX.r3.1HG0060110.1, HORVU.MOREX.r3.1HG0082030.1 ... |
| Poaceae | Lolium multiflorum | 5 | gene-QYE76_016086, gene-QYE76_016099, gene-QYE76_055031 ... |
| Poaceae | Oryza coarctata | 6 | Oco05G010540, Oco06G010750, Oco09G014990, Oco10G014930 ... |
| Poaceae | Oryza sativa | 4 | LOC_Os03g17980.1, LOC_Os05g45420.1, LOC_Os07g09610.1 ... |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_01G390500, gene-BS78_03G264100 ... |
| Poaceae | Puccinellia tenuiflora | 6 | Pt_Chr0105081, Pt_Chr0106309, Pt_Chr0503977, Pt_Chr0504065 ... |
| Poaceae | Sporobolus alterniflorus | 10 | Chr01G014440, Chr01G031900, Chr02G010590, Chr04G008600 ... |
| Poaceae | Thinopyrum elongatum | 7 | Tel1E01G545000, Tel3E01G465000, Tel3E01G795300 ... |
| Poaceae | Triticum dicoccoides | 5 | gene_TRIDC1AG035900, gene_TRIDC1AG051710 ... |
| Poaceae | Triticum aestivum | 17 | TraesCS1A02G350500.1, TraesCS1B02G364800.1 ... |
| Poaceae | Zea mays | 5 | Zm00001eb013270_P002, Zm00001eb094400_P001 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-1974, nbis-gene-25066 |
| Poaceae | Zoysia macrostachya | 4 | Zma_g1455, Zma_g25072, Zma_g27272, Zma_g28657 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG18.294, evm.TU.LG18.295, evm.TU.LG26.750 ... |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc02g11960, gene.Posoc06g08290 |
| Rhizophoraceae | Bruguiera sexangula | 3 | evm.TU.60367.4, evm.TU.60368.4, evm.TU.Scaffold_6_RagTag.311 |
| Rhizophoraceae | Carallia pectinifolia | 4 | nbisL1-mrna-15167, nbisL1-mrna-15168, nbisL1-mrna-15169 ... |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-10559 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-2937 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000011l.175, evm.TU.utg000019l.171 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00001650, Maker00008253 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-12152 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-18255 |
| Salicaceae | Populus euphratica | 3 | populus_peu00652, populus_peu09383, populus_peu16357 |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132605525, gene-LOC132621395, gene-LOC132632910 |
| Solanaceae | Solanum chilense | 2 | SOLCI000962600, SOLCI001070000 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107011583, gene-LOC107015395 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.596_chr01_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC01G1259 |
| Zosteraceae | Zostera marina | 3 | Zosma03g16510.v3.1, Zosma04g21400.v3.1, Zosma06g29410.v3.1 |