Basic Information
Locus ID:
TC01G1247
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 51930917 | 51934397 | + | TC01G1247 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.74 | 74,425.35 Da | 55.03 | 55.20 | -0.83 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 390 | 446 | 7.8E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 587 | 644 | 1.6E-24 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 387 | 448 | 1.22E-25 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 578 | 646 | 1.83E-28 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 571 | 647 | 8.6E-35 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 376 | 449 | 6.7E-28 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 389 | 447 | 1.1E-36 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 586 | 645 | 6.5E-38 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 390 | 448 | 24.409048 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 581 | 646 | 37.160442 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 294 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 65 | 99 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 287 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 440 | 460 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 506 | 573 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 394 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 440 | 456 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 520 | 534 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 109 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_034706251.1 | probable WRKY transcription factor 4 [Vitis riparia] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | J9ZY78 | WRKY transcription factor 5 (Fragment) OS=Tamarix hispida OX=189793 GN=WRKY5 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology