Basic Information
Locus ID:
TC01G1045
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 41288195 | 41296256 | - | TC01G1045 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.96 | 103,773.72 Da | 50.78 | 63.20 | -0.87 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 46 | 250 | 2.88E-7 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 699 | 759 | 1.5E-8 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 353 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 558 | 629 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 351 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 771 | 959 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 771 | 794 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 513 | 534 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 801 | 837 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 646 | 698 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 904 | 920 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 838 | 903 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 403 | 475 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 328 | 704 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 492 | 512 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 264 | 285 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_006450299.1 | muscle M-line assembly protein unc-89 [Citrus clementina] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | V4WB02 | Tudor domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10007391mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology