Basic Information
Locus ID:
TC01G0550
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 17915196 | 17918376 | + | TC01G0550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 108,688.65 Da | 35.13 | 101.35 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 93 | 152 | 4.0E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 526 | 585 | 7.3E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 706 | 983 | 5.4E-46 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 17 | 65 | 3.2E-7 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 247 | 591 | 7.06E-69 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 53 | 302 | 1.33E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 698 | 987 | 2.73E-72 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 528 | 618 | 2.3E-24 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 790 | 1003 | 2.3E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 187 | 379 | 2.0E-57 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 380 | 452 | 5.8E-18 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 696 | 789 | 5.0E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 16 | 186 | 6.8E-43 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 453 | 526 | 7.5E-16 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 428 | 452 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 91 | 115 | 35.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 704 | 987 | 9.9E-35 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 259 | 283 | 390.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 187 | 211 | 94.0 | IPR003591 |
| SMART | SM00364 | LRR_bac_2 | 91 | 111 | 590.0 | - |
| SMART | SM00364 | LRR_bac_2 | 572 | 592 | 22.0 | - |
| SMART | SM00364 | LRR_bac_2 | 187 | 208 | 37.0 | - |
| SMART | SM00369 | LRR_typ_2 | 357 | 380 | 410.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 331 | 355 | 26.0 | IPR003591 |
| SMART | SM00364 | LRR_bac_2 | 139 | 159 | 120.0 | - |
| SMART | SM00369 | LRR_typ_2 | 307 | 330 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 548 | 572 | 260.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 704 | 994 | 38.859325 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 710 | 734 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 835 | 847 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 991 | 1010 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_018827231.1 | MDIS1-interacting receptor like kinase 1 [Juglans regia] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2I4F6G2 | MDIS1-interacting receptor like kinase 1 OS=Juglans regia OX=51240 GN=LOC108995985 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology