Basic Information
Locus ID:
TC01G0470
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 15207290 | 15219842 | + | TC01G0470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 140,852.42 Da | 48.00 | 72.86 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 199 | 295 | 1.4498E-47 | - |
| CDD | cd13999 | STKc_MAP3K-like | 992 | 1254 | 4.49131E-104 | - |
| Pfam | PF00564 | PB1 domain | 212 | 295 | 1.3E-22 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 988 | 1254 | 8.6E-62 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 211 | 300 | 1.57E-23 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 974 | 1253 | 8.03E-73 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 214 | 297 | 2.1E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1074 | 1273 | 1.5E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 979 | 1073 | 3.8E-25 | - |
| SMART | SM00220 | serkin_6 | 986 | 1260 | 5.5E-53 | IPR000719 |
| SMART | SM00666 | PB1_new | 210 | 297 | 1.4E-35 | IPR000270 |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 195 | 295 | 11.194143 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 986 | 1261 | 40.399933 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1111 | 1123 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 992 | 1017 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1105 | 1123 | 1.7E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1225 | 1247 | 1.7E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1068 | 1081 | 1.7E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1160 | 1170 | 1.7E-10 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24715.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_021767464.1 | uncharacterized protein LOC110731868 [Chenopodium quinoa] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MLL6 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology