Basic Information
Locus ID:
TC01G0130
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 3617887 | 3622959 | - | TC01G0130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 106,652.98 Da | 41.02 | 91.18 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 636 | 904 | 1.7034E-95 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 633 | 900 | 2.7E-46 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 64 | 9.2E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 378 | 1.58E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 616 | 908 | 9.04E-78 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 184 | 4.2E-40 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 604 | 705 | 6.1E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 285 | 425 | 2.3E-14 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 706 | 925 | 5.9E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 185 | 284 | 1.7E-16 | IPR032675 |
| SMART | SM00220 | serkin_6 | 630 | 901 | 2.8E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 630 | 905 | 38.20916 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 750 | 762 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 636 | 658 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021299996.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Herrania umbratica] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J1BKK3 | probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Herrania umbratica OX=108875 GN=LOC110428494 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology