Basic Information
Locus ID:
TC00000032
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
SRSF protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1 | 1380439 | 1390285 | + | TC00000032 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.47 | 67,841.22 Da | 47.28 | 77.13 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 60 | 511 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 317 | 511 | 8.2E-20 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 71 | 211 | 1.4E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 67 | 520 | 1.26E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 47 | 153 | 5.0E-40 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 154 | 512 | 7.3E-76 | - |
| SMART | SM00220 | serkin_6 | 71 | 511 | 2.0E-56 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 71 | 511 | 31.650986 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 77 | 100 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 198 | 210 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 283 | 309 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 521 | 581 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 548 | 565 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 50 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44850.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010683926.2 | serine/threonine-protein kinase SRPK [Beta vulgaris subsp. vulgaris] | 0 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9DAZ9 | Protein kinase domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology