Basic Information
Locus ID:
SpUn1948_0010.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
leucine-rich repeat protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| un1948 | 310 | 501 | + | SpUn1948_0010.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 6,998.80 Da | 40.09 | 83.49 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 1 | 63 | 1.1E-13 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 63 | 2.83E-23 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 63 | 4.4E-23 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 63 | 19.241333 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 12 | 24 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46410.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_019099904.1 | PREDICTED: putative receptor-like protein kinase At3g46340 isoform X2 [Camelina sativa] | 0 |
| Q9SNA3 | Putative receptor-like protein kinase At3g46340 OS=Arabidopsis thaliana OX=3702 GN=At3g46340 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1J3D875 | Putative receptor-like protein kinase (Fragment) OS=Noccaea caerulescens OX=107243 GN=GA_TR11503_c0_g1_i1_g.36963 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 1 | COCNU_06G004800 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp5g08540.v2.2, SpUn1948_0010.v2.2 |
| Casuarinaceae | Casuarina equisetifolia | 4 | Ceq02G0918, Ceq02G0924, Ceq02G0926, Ceq02G0935 |
| Casuarinaceae | Casuarina glauca | 3 | Cgl02G0949, Cgl02G0953, Cgl02G0963 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-14979 |