HalophFGD

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Basic Information
Locus ID: SpUn0675_0010.v2.2
Species & Taxonomic ID: Schrenkiella parvula & 98039
Genome Assembly: v2.2
Description: GTPase activity
Maps and Mapping Data
Chromosome Start End Strand ID
un0675 585 2462 - SpUn0675_0010.v2.2
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.63 50,121.77 Da 56.50 59.09 -1.07
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Coils Coil Coil 258 285 - -
KEGG Pathway
KO Term:
K06949 (ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100])
Pathway:
ko00730 (Thiamine metabolism) map00730 (Thiamine metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways)
Reaction:
R00615 (Thiamin diphosphate + H2O <=> Thiamin monophosphate + Orthophosphate) R02135 (Thiamin monophosphate + H2O <=> Thiamine + Orthophosphate)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_048622225.1 uncharacterized protein LOC106418018 [Brassica napus] 0
TrEMBL A0A1J3ITJ8 Polyprotein (Fragment) OS=Noccaea caerulescens OX=107243 GN=MP_TR22325_c7_g1_i1_g.65035 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Brassicaceae Schrenkiella parvula 26 Sp1g30460.v2.2, Sp1g31270.v2.2, Sp1g31830.v2.2 ...
Sp2g06820.v2.2, Sp2g08000.v2.2, Sp3g22870.v2.2, Sp3g24010.v2.2, Sp3g25030.v2.2, Sp3g25310.v2.2, Sp4g06980.v2.2, Sp4g07460.v2.2, Sp4g09460.v2.2, Sp4g09617.v2.2, Sp5g21160.v2.2, Sp6g10080.v2.2, Sp6g10120.v2.2, Sp6g10150.v2.2, Sp7g03190.v2.2, Sp7g08700.v2.2, Sp7g10020.v2.2, Sp7g10650.v2.2, SpUn0014_0020.v2.2, SpUn0094_0030.v2.2, SpUn0667_0010.v2.2, SpUn0675_0010.v2.2, SpUn1142_0010.v2.2
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.