Basic Information
Locus ID:
SpUn0657_0010.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Short Name:
ATR1
Description:
belongs to the flavoprotein pyridine nucleotide cytochrome reductase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| un0657 | 2000 | 3233 | - | SpUn0657_0010.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.89 | 12,223.59 Da | 31.17 | 89.15 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00175 | Oxidoreductase NAD-binding domain | 2 | 70 | 1.3E-5 | IPR001433 |
| SUPERFAMILY | SSF52343 | Ferredoxin reductase-like, C-terminal NADP-linked domain | 2 | 106 | 7.0E-28 | IPR039261 |
| Gene3D | G3DSA:3.40.50.80 | - | 1 | 106 | 6.3E-36 | IPR039261 |
| PRINTS | PR00371 | Flavoprotein pyridine nucleotide cytochrome reductase signature | 55 | 63 | 1.9E-8 | IPR001709 |
| PRINTS | PR00371 | Flavoprotein pyridine nucleotide cytochrome reductase signature | 32 | 48 | 1.9E-8 | IPR001709 |
| PRINTS | PR00371 | Flavoprotein pyridine nucleotide cytochrome reductase signature | 1 | 12 | 1.9E-8 | IPR001709 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24520.2 | P450 reductase 1. Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism. | 0 |
| RefSeq | XP_018472310.1 | PREDICTED: NADPH--cytochrome P450 reductase 1-like [Raphanus sativus] | 0 |
| Q9SB48 | NADPH--cytochrome P450 reductase 1 OS=Arabidopsis thaliana OX=3702 GN=ATR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A398AP89 | NADPH--cytochrome P450 reductase OS=Brassica campestris OX=3711 GN=BRARA_A01457 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Schrenkiella parvula | 1 | SpUn0657_0010.v2.2 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate02g14120, gene.Thate08g08970 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_032376 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0402840 |
| Poaceae | Zea mays | 5 | Zm00001eb010260_P001, Zm00001eb040630_P001 ... |
| Salicaceae | Populus euphratica | 1 | populus_peu32170 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132604019 |