Basic Information
Locus ID:
SpUn0426_0010.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
ubiquitin-protein transferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| un0426 | 1198 | 1630 | - | SpUn0426_0010.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.05 | 13,719.78 Da | 52.63 | 66.50 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_024006785.1 | E3 ubiquitin-protein ligase MBR2 [Eutrema salsugineum] | 0 |
| TrEMBL | V4MIM2 | RING-type domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10005473mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G67120.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10005473m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp2g04390.v2.2, SpUn0426_0010.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB06g014870.2N |