Basic Information
Locus ID:
SpUn0199_0030.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
26S proteasome non-ATPase regulatory subunit 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| un0199 | 3868 | 6230 | + | SpUn0199_0030.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.04 | 42,163.28 Da | 44.89 | 83.17 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 257 | 287 | 0.017 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 346 | 375 | 0.017 | IPR001680 |
| Pfam | PF18004 | 26S proteasome regulatory subunit RPN2 C-terminal domain | 35 | 91 | 1.1E-11 | IPR040623 |
| Pfam | PF00400 | WD domain, G-beta repeat | 174 | 205 | 0.042 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 147 | 375 | 9.36E-38 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 224 | 375 | 8.6E-27 | IPR015943 |
| Gene3D | G3DSA:1.25.10.10 | - | 1 | 49 | 1.1E-7 | IPR011989 |
| Gene3D | G3DSA:2.130.10.10 | - | 148 | 223 | 2.9E-13 | IPR015943 |
| SMART | SM00320 | WD40_4 | 255 | 293 | 6.7E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 124 | 169 | 22.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 339 | 375 | 46.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 296 | 336 | 240.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 173 | 212 | 2.6E-4 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 180 | 212 | 8.837541 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 345 | 375 | 10.258324 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 345 | 375 | 10.642123 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32700.6 | LEUNIG_homolog. Encodes a WD40 repeat and LUFS domain containing protein that is similar to LUG. Interacts physically with SEUSS and likely functions as part of a repressor complex that represses AG. | 0 |
| RefSeq | XP_010522422.1 | PREDICTED: transcriptional corepressor LEUNIG_HOMOLOG isoform X2 [Tarenaya hassleriana] | 0 |
| O48847 | Transcriptional corepressor LEUNIG_HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=LUH PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2BPM1 | Proteasome/cyclosome repeat OS=Arabidopsis suecica OX=45249 GN=ISN44_As07g007120 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology