Basic Information
Locus ID:
SpUn0190_0010.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Short Name:
CPK16
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| un0190 | 2831 | 3602 | + | SpUn0190_0010.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.83 | 11,650.48 Da | 35.42 | 99.31 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 8 | 95 | 1.8E-21 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 95 | 1.64E-25 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 9 | 95 | 1.7E-27 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 28 | 45 | 1.7E-27 | - |
| SMART | SM00220 | serkin_6 | 2 | 100 | 0.0055 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 102 | 19.241333 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17890.1 | calcium-dependent protein kinase 16. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_006409223.1 | calcium-dependent protein kinase 16 [Eutrema salsugineum] | 0 |
| Q7XJR9 | Calcium-dependent protein kinase 16 OS=Arabidopsis thaliana OX=3702 GN=CPK16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6D2I542 | Calcium-dependent protein kinase 28 OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS9337 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10011937m.g.v1.0, Thhalv10023098m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | SpUn0190_0010.v2.2 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G04062 |
| Poaceae | Zea mays | 2 | Zm00001eb085930_P001, Zm00001eb233750_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-32968, nbis-gene-57804 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107027768, gene-LOC114075599 |