Basic Information
Locus ID:
SpUn0138_0020.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| un0138 | 7409 | 7969 | + | SpUn0138_0020.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 15,496.62 Da | 57.00 | 88.15 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13200.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | NP_172779.1 | F-box and associated interaction domains-containing protein [Arabidopsis thaliana] | 0 |
| Q9SAF4 | Putative F-box/kelch-repeat protein At1g13200 OS=Arabidopsis thaliana OX=3702 GN=At1g13200 PE=4 SV=1 | 0 | |
| TrEMBL | A0A8T2BVQ4 | F-box associated domain type 1 OS=Arabidopsis thaliana x Arabidopsis arenosa OX=1240361 GN=ISN45_Aa01g005300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 15 | AT1G09650.1, AT1G11270.1, AT1G12490.1, AT1G12855.1 ... |
| Brassicaceae | Eutrema salsugineum | 30 | Thhalv10000283m.g.v1.0, Thhalv10002950m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 4 | Sp1g27610.v2.2, Sp2g14700.v2.2, Sp6g09040.v2.2 ... |
| Brassicaceae | Brassica nigra | 27 | BniB01g008490.2N, BniB02g006100.2N, BniB02g006160.2N ... |
| Plantaginaceae | Plantago ovata | 1 | Pov_00035511 |