halophFGD

Basic Information

Locus ID: SpUn0004_0180.v2.2

Species & Taxonomic ID: Schrenkiella parvula & 98039

Genome Assembly: v2.2

Description: Alpha,alpha-trehalose-phosphate synthase UDP-forming

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
un0004	115381	115741	-	SpUn0004_0180.v2.2

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.45	10,313.33 Da	43.60	48.80	-1.00

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase	9	65	1.32E-6	-
Gene3D	G3DSA:3.40.50.2000	Glycogen Phosphorylase B;	2	88	2.6E-9	-
MobiDBLite	mobidb-lite	consensus disorder prediction	70	92	-	-

KEGG Pathway

KO Term:

K16055 (trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12])

Pathway:

ko00500 (Starch and sucrose metabolism) map00500 (Starch and sucrose metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways)

Reaction:

R02737 (UDP-glucose + alpha-D-Glucose 6-phosphate <=> UDP + alpha,alpha'-Trehalose 6-phosphate) R02778 (alpha,alpha'-Trehalose 6-phosphate + H2O <=> alpha,alpha-Trehalose + Orthophosphate)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G16980.2	-
RefSeq	XP_022558138.2	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 3 [Brassica napus]
Swiss-Prot	Q9FZ57	Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Arabidopsis thaliana OX=3702 GN=TPS2 PE=3 SV=1
TrEMBL	A0A8S9GRI0	Glyco_transf_20 domain-containing protein OS=Brassica cretica OX=69181 GN=F2Q70_00020056 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Atriplex hortensis	3	Ah012173, Ah020294, Ah022909
Brassicaceae	Schrenkiella parvula	1	SpUn0004_0180.v2.2
Poaceae	Triticum dicoccoides	2	gene_TRIDC2BG013740, gene_TRIDC6BG040670