Basic Information
Locus ID:
SpUn0003_0080.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| un0003 | 46209 | 47144 | + | SpUn0003_0080.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.32 | 35,448.65 Da | 42.18 | 95.11 | -0.05 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G28280.1 | 0 | |
| RefSeq | XP_018435663.1 | PREDICTED: F-box protein At3g28330-like [Raphanus sativus] | 0 |
| Q9LHD8 | Putative F-box protein At3g28280 OS=Arabidopsis thaliana OX=3702 GN=At3g28280 PE=4 SV=2 | 0 | |
| TrEMBL | A0A6D2IZH5 | F-box domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS19318 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 10 | AT1G15680.1, AT1G49990.1, AT3G23950.1, AT3G23970.1 ... |
| Brassicaceae | Eutrema salsugineum | 14 | Thhalv10000704m.g.v1.0, Thhalv10001535m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 6 | Sp1g36850.v2.2, Sp2g04630.v2.2, Sp3g21990.v2.2 ... |
| Brassicaceae | Brassica nigra | 20 | BniB01g029840.2N, BniB01g029880.2N, BniB01g037070.2N ... |
| Plantaginaceae | Plantago ovata | 1 | Pov_00032378 |