Basic Information
Locus ID:
Sp7g35260.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-6 | 1012709 | 1015117 | - | Sp7g35260.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.54 | 53,685.26 Da | 45.71 | 83.90 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 113 | 344 | 3.6E-72 | IPR027356 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 113 | 368 | 74.509377 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 392 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 480 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 398 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 451 | 472 | - | - |
| Coils | Coil | Coil | 404 | 424 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G37590.1 | Phototropic-responsive NPH3 family protein. A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. | 0 |
| RefSeq | XP_006411871.1 | BTB/POZ domain-containing protein NPY5 [Eutrema salsugineum] | 0 |
| Q0WL52 | Phototropic-responsive NPH3 family protein NPY5 OS=Arabidopsis thaliana OX=3702 GN=NPY5 PE=1 SV=2 | 0 | |
| TrEMBL | V4MAB4 | NPH3 domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10024767mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology