Basic Information
Locus ID:
Sp7g32820.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
WD-40 repeat-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-6 | 14209 | 15384 | - | Sp7g32820.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.47 | 19,321.85 Da | 45.12 | 65.95 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:2.130.10.10 | - | 86 | 166 | 1.4E-19 | IPR015943 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 173 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 81 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 41 | 55 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G35050.1 | Transducin family protein / WD-40 repeat family protein. Encodes a WD-40 repeat protein similar to yeast MSI1. The predicted protein has a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase | 0 |
| RefSeq | XP_010432345.1 | PREDICTED: WD-40 repeat-containing protein MSI3 [Camelina sativa] | 0 |
| O22469 | WD-40 repeat-containing protein MSI3 OS=Arabidopsis thaliana OX=3702 GN=MSI3 PE=1 SV=2 | 0 | |
| TrEMBL | R0GWB8 | CAF1C_H4-bd domain-containing protein (Fragment) OS=Capsella rubella OX=81985 GN=CARUB_v10004773mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology