Basic Information
Locus ID:
Sp7g32180.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Short Name:
XLG2
Description:
extra-large GTP-binding protein 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-5 | 2504571 | 2507851 | + | Sp7g32180.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.57 | 98,728.32 Da | 52.32 | 76.81 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00503 | G-protein alpha subunit | 476 | 817 | 5.8E-54 | IPR001019 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 481 | 814 | 1.13E-14 | IPR027417 |
| SUPERFAMILY | SSF47895 | Transducin (alpha subunit), insertion domain | 508 | 649 | 2.35E-15 | IPR011025 |
| Gene3D | G3DSA:3.40.50.300 | - | 482 | 818 | 1.9E-54 | IPR027417 |
| Gene3D | G3DSA:1.10.400.10 | - | 515 | 652 | 1.9E-54 | IPR011025 |
| SMART | SM00275 | galpha_1 | 463 | 811 | 3.3E-10 | IPR001019 |
| ProSiteProfiles | PS51882 | G-alpha domain profile. | 479 | 874 | 42.193855 | IPR001019 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 118 | 137 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 544 | 563 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 87 | 162 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 539 | 563 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
ko04015 (Rap1 signaling pathway)
map04015 (Rap1 signaling pathway)
ko04022 (cGMP-PKG signaling pathway)
map04022 (cGMP-PKG signaling pathway)
ko04024 (cAMP signaling pathway)
map04024 (cAMP signaling pathway)
ko04062 (Chemokine signaling pathway)
map04062 (Chemokine signaling pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
map04611 (Platelet activation)
map04670 (Leukocyte transendothelial migration)
ko04916 (Melanogenesis)
map04916 (Melanogenesis)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34390.1 | extra-large GTP-binding protein 2. | 0 |
| RefSeq | XP_006412233.1 | extra-large guanine nucleotide-binding protein 2 [Eutrema salsugineum] | 0 |
| C6KIE6 | Extra-large guanine nucleotide-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=XLG2 PE=1 SV=1 | 0 | |
| TrEMBL | V4P2U0 | Extra-large guanine nucleotide-binding protein 1-like OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10024380mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 6 | jg26233, jg28719, jg28720, jg28724, jg30277, jg40092 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_16902, gene_21599 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah010334, Ah026672 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_6g138440, BVRB_9g218240 |
| Amaranthaceae | Salicornia bigelovii | 4 | Sbi_jg12509, Sbi_jg45804, Sbi_jg51541, Sbi_jg5808 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg13561, Seu_jg20166 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00013493, GOSA_00022394 |
| Amaranthaceae | Suaeda glauca | 5 | Sgl00025, Sgl05094, Sgl34187, Sgl39484, Sgl39533 |
| Amaranthaceae | Chenopodium album | 6 | gene:ENSEOMG00000000492, gene:ENSEOMG00000002698 ... |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.6AG0018580, CQ.Regalona.r1.6BG0019680 ... |
| Anacardiaceae | Pistacia vera | 5 | pistato.v30113590, pistato.v30113600, pistato.v30207110 ... |
| Apiaceae | Apium graveolens | 5 | Ag10G02270, Ag3G00207, Ag6G02593, Ag9G00129, AgUnG00077 |
| Arecaceae | Cocos nucifera | 2 | COCNU_06G017810, COCNU_14G010180 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103709166, gene-LOC103723888 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_03.2304.V1.1, AsparagusV1_05.3397.V1.1 ... |
| Asteraceae | Flaveria trinervia | 2 | Ftri14G14598, Ftri17G19545 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT2G23460.1, AT4G34390.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10000039m.g.v1.0, Thhalv10024380m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp4g02460.v2.2, Sp7g32180.v2.2 |
| Brassicaceae | Brassica nigra | 4 | BniB01g020300.2N, BniB02g086980.2N, BniB03g020630.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq08G1664, Ceq09G0026 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl08G1704, Cgl09G0031 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno01g15050, gene.Cymno11g03530 |
| Hydrocharitaceae | Thalassia testudinum | 3 | gene.Thate03g05340, gene.Thate06g13380, gene.Thate06g16410 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-10534, nbisL1-mrna-7068 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG02.2228, evm.TU.LG08.72 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00029359, Pov_00035537 |
| Plumbaginaceae | Limonium bicolor | 4 | Lb1G05965, Lb1G05969, Lb3G17191, Lb3G18590 |
| Poaceae | Echinochloa crus-galli | 3 | AH05.3920, BH05.4000, CH05.4200 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0396300, gene-QOZ80_5BG0444560 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0437540.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_000482 |
| Poaceae | Oryza coarctata | 2 | Oco23G009580, Oco24G009310 |
| Poaceae | Oryza sativa | 1 | LOC_Os12g40190.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_08G127700 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0704170 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr04G018270, Chr06G018900, Chr19G008290, Chr27G008330 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G134400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG009970, gene_TRIDC5BG011620 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G064400.1, TraesCS5B02G068300.2 ... |
| Poaceae | Zea mays | 1 | Zm00001eb030570_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-30473 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g25269, Zma_g26058 |
| Portulacaceae | Portulaca oleracea | 5 | evm.TU.LG02.410, evm.TU.LG05.246, evm.TU.LG08.1866 ... |
| Posidoniaceae | Posidonia oceanica | 3 | gene.Posoc03g28150, gene.Posoc04g06780, gene.Posoc06g16910 |
| Rhizophoraceae | Bruguiera sexangula | 3 | evm.TU.Scaffold_1_RagTag.2148, evm.TU.Scaffold_3_RagTag.307 ... |
| Rhizophoraceae | Carallia pectinifolia | 3 | nbisL1-mrna-17195, nbisL1-mrna-549, nbisL1-mrna-5956 |
| Rhizophoraceae | Ceriops tagal | 4 | nbisL1-mrna-11255, nbisL1-mrna-14543, nbisL1-mrna-16927 ... |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-11853, nbisL1-mrna-3389, nbisL1-mrna-6032 |
| Rhizophoraceae | Kandelia candel | 4 | evm.TU.utg000011l.1182, evm.TU.utg000016l.178 ... |
| Rhizophoraceae | Kandelia obovata | 4 | Maker00008370, Maker00012723, Maker00016257, Maker00017354 |
| Rhizophoraceae | Rhizophora apiculata | 3 | nbisL1-mrna-15547, nbisL1-mrna-4740, nbisL1-mrna-6464 |
| Rhizophoraceae | Rhizophora mangle | 3 | nbisL1-mrna-14077, nbisL1-mrna-2275, nbisL1-mrna-3159 |
| Salicaceae | Populus euphratica | 5 | populus_peu08944, populus_peu14269, populus_peu23478 ... |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132599116, gene-LOC132623225 |
| Solanaceae | Solanum chilense | 2 | SOLCI002767500, SOLCI003385200 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107010039, gene-LOC107011325 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.11377_chr02_-, gene_3820 |
| Tamaricaceae | Tamarix chinensis | 2 | TC04G2149, TC10G0537 |
| Zosteraceae | Zostera marina | 1 | Zosma06g06910.v3.1 |