Basic Information
Locus ID:
Sp7g31300.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-5 | 2195583 | 2197985 | + | Sp7g31300.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 46,821.92 Da | 61.99 | 92.08 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 260 | 303 | 1.48555E-17 | - |
| Pfam | PF13639 | Ring finger domain | 260 | 303 | 2.3E-13 | IPR001841 |
| Pfam | PF12609 | Wound-induced protein | 12 | 87 | 2.6E-13 | IPR022251 |
| SUPERFAMILY | SSF57850 | RING/U-box | 249 | 309 | 3.79E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 237 | 311 | 3.7E-22 | IPR013083 |
| SMART | SM00184 | ring_2 | 261 | 302 | 1.1E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 261 | 303 | 13.079398 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33565.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_024004674.1 | LOW QUALITY PROTEIN: RING-H2 finger protein ATL52 [Eutrema salsugineum] | 0 |
| Q8LFY8 | RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8S2ASV9 | RING-type E3 ubiquitin transferase OS=Arabidopsis arenosa OX=38785 GN=AARE701A_LOCUS17784 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology