Basic Information
Locus ID:
Sp7g29800.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Aspartate aminotransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-5 | 1576016 | 1578809 | - | Sp7g29800.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.80 | 46,071.18 Da | 39.51 | 106.77 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 130 | 397 | 4.2E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 104 | 399 | 3.78E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 90 | 204 | 2.7E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 205 | 404 | 1.5E-57 | - |
| SMART | SM00220 | serkin_6 | 129 | 400 | 4.0E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 129 | 400 | 39.679096 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 250 | 262 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 135 | 158 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko00220 (Arginine biosynthesis)
map00220 (Arginine biosynthesis)
ko00250 (Alanine, aspartate and glutamate metabolism)
map00250 (Alanine, aspartate and glutamate metabolism)
ko00270 (Cysteine and methionine metabolism)
map00270 (Cysteine and methionine metabolism)
ko00330 (Arginine and proline metabolism)
map00330 (Arginine and proline metabolism)
ko00350 (Tyrosine metabolism)
map00350 (Tyrosine metabolism)
ko00360 (Phenylalanine metabolism)
map00360 (Phenylalanine metabolism)
ko00400 (Phenylalanine, tyrosine and tryptophan biosynthesis)
map00400 (Phenylalanine, tyrosine and tryptophan biosynthesis)
ko00950 (Isoquinoline alkaloid biosynthesis)
map00950 (Isoquinoline alkaloid biosynthesis)
ko00960 (Tropane, piperidine and pyridine alkaloid biosynthesis)
map00960 (Tropane, piperidine and pyridine alkaloid biosynthesis)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01210 (2-Oxocarboxylic acid metabolism)
map01210 (2-Oxocarboxylic acid metabolism)
ko01230 (Biosynthesis of amino acids)
map01230 (Biosynthesis of amino acids)
Reaction:
R00355 (L-Aspartate + 2-Oxoglutarate <=> Oxaloacetate + L-Glutamate)
R00694 (L-Phenylalanine + 2-Oxoglutarate <=> Phenylpyruvate + L-Glutamate)
R00734 (L-Tyrosine + 2-Oxoglutarate <=> 3-(4-Hydroxyphenyl)pyruvate + L-Glutamate)
R00896 (L-Cysteine + 2-Oxoglutarate <=> Mercaptopyruvate + Glutamate)
R02433 (L-Cysteate + 2-Oxoglutarate <=> 3-Sulfopyruvate + L-Glutamate)
R02619 (3-Sulfino-L-alanine + 2-Oxoglutarate <=> 3-Sulfinylpyruvate + L-Glutamate)
R05052 (L-erythro-4-Hydroxyglutamate + 2-Oxoglutarate <=> (4R)-4-Hydroxy-2-oxoglutarate + L-Glutamate)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32000.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013666875.2 | probable receptor-like protein kinase At1g80640 [Brassica napus] | 0 |
| Q0V7T5 | Probable receptor-like protein kinase At1g80640 OS=Arabidopsis thaliana OX=3702 GN=At1g80640 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1J3H6J5 | Putative receptor-like protein kinase OS=Noccaea caerulescens OX=107243 GN=LE_TR21727_c0_g1_i1_g.69696 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg16536, jg18291, jg23341, jg25472 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_26260, gene_8199 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah034811 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g031070 |
| Amaranthaceae | Salicornia bigelovii | 4 | Sbi_jg11657, Sbi_jg21091, Sbi_jg22713, Sbi_jg46742 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg16586, Seu_jg20912 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00005109, GOSA_00018297 |
| Amaranthaceae | Suaeda glauca | 5 | Sgl56008, Sgl60651, Sgl61201, Sgl62383, Sgl66930 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000016588, gene:ENSEOMG00000020754 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1BG0021780, CQ.Regalona.r1.2AG0023540 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30129650, pistato.v30250650 |
| Apiaceae | Apium graveolens | 3 | Ag4G00091, Ag5G00163, Ag7G01345 |
| Arecaceae | Cocos nucifera | 2 | COCNU_01G005540, COCNU_08G003860 |
| Arecaceae | Phoenix dactylifera | 4 | gene-LOC103703658, gene-LOC103706568, gene-LOC120104241 ... |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_05.3340.V1.1, AsparagusV1_08.801.V1.1 |
| Asteraceae | Flaveria trinervia | 4 | Ftri10G32678, Ftri16G10975, Ftri16G14156, Ftri18G10731 |
| Brassicaceae | Arabidopsis thaliana | 4 | AT1G80640.1, AT2G25220.2, AT4G32000.2, AT5G11020.1 |
| Brassicaceae | Eutrema salsugineum | 4 | Thhalv10000655m.g.v1.0, Thhalv10013829m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 4 | Sp4g04340.v2.2, Sp5g35120.v2.2, Sp6g32470.v2.2 ... |
| Brassicaceae | Brassica nigra | 4 | BniB01g018060.2N, BniB02g050980.2N, BniB05g075430.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq02G0376, Ceq04G2451 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl02G0396, Cgl04G2677 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno06g07980 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g09050 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-698 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG01.794, evm.TU.LG07.1500 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00020172, Pov_00034508 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb1G04732, Lb1G04737 |
| Poaceae | Echinochloa crus-galli | 9 | AH06.2455, AH07.605, AH08.1087, BH06.2253, BH07.728 ... |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_2AG0103970, gene-QOZ80_2BG0157270 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.6HG0568390.1, HORVU.MOREX.r3.7HG0743900.1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_021073, gene-QYE76_032200, gene-QYE76_036640 |
| Poaceae | Oryza coarctata | 6 | Oco03G004210, Oco04G004170, Oco09G006570, Oco10G006810 ... |
| Poaceae | Oryza sativa | 3 | LOC_Os02g08530.1, LOC_Os05g25540.1, LOC_Os08g18920.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_04G062000, gene-BS78_10G207700 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0202291, Pt_Chr0401555, Pt_Chr0702843 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr05G008630, Chr06G033840, Chr0G007760, Chr10G019030 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel6E01G304700, Tel7E01G877000 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC6AG019990, gene_TRIDC6BG026000 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS6A02G145700.1, TraesCS6B02G174100.2 ... |
| Poaceae | Zea mays | 3 | Zm00001eb234200_P003, Zm00001eb275120_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-33578 |
| Poaceae | Zoysia macrostachya | 4 | Zma_g12316, Zma_g15074, Zma_g22765, Zma_g30897 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG05.1542, evm.TU.LG07.1210, evm.TU.LG07.1819 ... |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g12290 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_10_RagTag.884, evm.TU.Scaffold_18_RagTag.271 |
| Rhizophoraceae | Carallia pectinifolia | 3 | nbisL1-mrna-13591, nbisL1-mrna-28265, nbisL1-mrna-28304 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-6173, nbisL1-mrna-7481 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-7771, nbisL1-mrna-9137 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000004l.196, evm.TU.utg000023l.240 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00004252, Maker00018739 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-14975, nbisL1-mrna-3747 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-17195, nbisL1-mrna-7824 |
| Salicaceae | Populus euphratica | 4 | populus_peu04077, populus_peu04713, populus_peu12968 ... |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132615074, gene-LOC132633048 |
| Solanaceae | Solanum chilense | 2 | SOLCI003305600, SOLCI003652000 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107013686, gene-LOC107018019 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.32971_chr09_+, gene_10170 |
| Tamaricaceae | Tamarix chinensis | 2 | TC01G1422, TC02G0604 |
| Zosteraceae | Zostera marina | 1 | Zosma03g01790.v3.1 |