Basic Information
Locus ID:
Sp7g29700.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Has 114836 Blast hits to 56273 proteins in 1914 species Archae - 187
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-5 | 1533638 | 1538756 | - | Sp7g29700.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 93,715.49 Da | 54.59 | 58.08 | -1.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 619 | 662 | 7.91005E-5 | IPR002999 |
| SUPERFAMILY | SSF48371 | ARM repeat | 3 | 241 | 7.68E-10 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 616 | 658 | 7.52E-8 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 612 | 665 | 5.0E-13 | - |
| SMART | SM00333 | TUDOR_7 | 614 | 673 | 1.9E-4 | IPR002999 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 683 | 706 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 618 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 767 | 790 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 321 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 445 | 467 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 468 | 482 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 322 | 336 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 817 | 839 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 404 | 444 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 496 | 518 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 667 | 865 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 348 | 391 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 519 | 563 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 578 | 611 | - | - |
| Coils | Coil | Coil | 731 | 751 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_006412540.1 | altered inheritance of mitochondria protein 21 isoform X3 [Eutrema salsugineum] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | V4MC74 | Neurofilament heavy polypeptide-like OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10024366mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology