Basic Information
Locus ID:
Sp7g29120.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-5 | 1316689 | 1319236 | - | Sp7g29120.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.63 | 75,234.35 Da | 34.60 | 93.56 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 368 | 634 | 1.8E-30 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 74 | 3.2E-11 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 66 | 245 | 2.99E-29 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 369 | 637 | 8.59E-51 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 146 | 237 | 2.0E-18 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 441 | 652 | 2.4E-38 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 331 | 440 | 1.0E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 145 | 3.4E-22 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 365 | 639 | 27.49559 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 639 | 675 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 346 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 309 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31250.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006412614.1 | probable LRR receptor-like serine/threonine-protein kinase At4g31250 [Eutrema salsugineum] | 0 |
| C0LGR9 | Probable LRR receptor-like serine/threonine-protein kinase At4g31250 OS=Arabidopsis thaliana OX=3702 GN=At4g31250 PE=1 SV=1 | 0 | |
| TrEMBL | V4MFP5 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10024605mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology