Basic Information
Locus ID:
Sp7g29100.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-5 | 1310609 | 1313658 | - | Sp7g29100.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.37 | 85,320.84 Da | 52.16 | 78.36 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 18 | 173 | 2.29908E-61 | - |
| CDD | cd14066 | STKc_IRAK | 476 | 736 | 1.43872E-84 | - |
| Pfam | PF00069 | Protein kinase domain | 471 | 727 | 3.1E-37 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 19 | 147 | 2.4E-9 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 19 | 147 | 1.09E-8 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 454 | 729 | 8.47E-66 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 447 | 542 | 3.1E-24 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 18 | 150 | 4.3E-11 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 543 | 752 | 9.6E-49 | - |
| SMART | SM00220 | serkin_6 | 470 | 733 | 3.3E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 470 | 733 | 34.336445 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 588 | 600 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 285 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 744 | 767 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 219 | 237 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 198 | 249 | - | - |
| Coils | Coil | Coil | 396 | 425 | - | - |
| Coils | Coil | Coil | 362 | 382 | - | - |
| Coils | Coil | Coil | 336 | 356 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31230.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_023634003.1 | U-box domain-containing protein 35 isoform X1 [Capsella rubella] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T1YH60 | UspA OS=Arabidopsis suecica OX=45249 GN=ISN44_As12g009660 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology