Basic Information
Locus ID:
Sp7g28410.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-5 | 1057971 | 1060901 | - | Sp7g28410.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 71,352.97 Da | 42.32 | 98.98 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 308 | 572 | 3.3E-41 | IPR001245 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 103 | 141 | 6.0E-7 | IPR025875 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 76 | 1.1E-12 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 279 | 5.1E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 287 | 575 | 2.6E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 275 | 381 | 2.4E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 218 | 1.2E-52 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 382 | 593 | 6.2E-59 | - |
| SMART | SM00220 | serkin_6 | 305 | 574 | 1.2E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 305 | 592 | 35.467167 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 424 | 436 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 311 | 333 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30520.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_024005152.1 | LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase At4g30520 [Eutrema salsugineum] | 0 |
| Q8VYT3 | Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8S2AU36 | Genome assembly, chromosome: 7 OS=Arabidopsis arenosa OX=38785 GN=AARE701A_LOCUS18043 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology