Basic Information
Locus ID:
Sp7g27020.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-5 | 453913 | 455472 | - | Sp7g27020.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.41 | 32,631.34 Da | 47.61 | 59.83 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 45 | 291 | 1.5E-86 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 174 | 281 | 1.47E-19 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 176 | 294 | 1.4E-41 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 180 | 282 | 24.655334 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 97 | 134 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 172 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 175 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 42 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29080.1 | phytochrome-associated protein 2. phytochrome-associated protein 2 (PAP2) | 0 |
| RefSeq | XP_020875094.1 | auxin-responsive protein IAA27 [Arabidopsis lyrata subsp. lyrata] | 0 |
| Q9ZSY8 | Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1J3I3K8 | Auxin-responsive protein OS=Noccaea caerulescens OX=107243 GN=LC_TR521_c0_g1_i1_g.1481 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology