Basic Information
Locus ID:
Sp7g26620.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-5 | 281495 | 284654 | - | Sp7g26620.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 110,544.62 Da | 32.73 | 102.87 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 68 | 3.5E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 477 | 536 | 9.4E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 701 | 973 | 4.4E-47 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 165 | 222 | 2.3E-6 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 693 | 976 | 8.2E-71 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 144 | 590 | 5.34E-63 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 420 | 517 | 3.4E-14 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 70 | 154 | 1.22E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 784 | 1003 | 2.9E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 136 | 8.6E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 246 | 307 | 3.3E-18 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 699 | 783 | 2.1E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 137 | 245 | 3.7E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 308 | 620 | 6.6E-87 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 163 | 186 | 10.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 427 | 451 | 70.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 187 | 211 | 51.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 699 | 976 | 2.2E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 94 | 117 | 95.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 331 | 355 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 547 | 571 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 259 | 283 | 380.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 699 | 983 | 38.717987 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 705 | 729 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 827 | 839 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 976 | 1013 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 990 | 1013 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_006412927.2 | MDIS1-interacting receptor like kinase 1 [Eutrema salsugineum] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | V4LUQ8 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10024302mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology