Basic Information
Locus ID:
Sp7g26470.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-5 | 208431 | 211526 | + | Sp7g26470.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 108,774.28 Da | 34.93 | 100.32 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 683 | 905 | 6.9E-42 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 21 | 60 | 3.8E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 112 | 171 | 1.8E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 498 | 557 | 1.2E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 401 | 461 | 2.3E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 212 | 588 | 6.12E-59 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 305 | 1.17E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 674 | 960 | 4.18E-73 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 176 | 3.3E-43 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 765 | 975 | 2.4E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 279 | 613 | 3.8E-98 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 177 | 278 | 2.3E-27 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 663 | 764 | 2.6E-20 | - |
| SMART | SM00369 | LRR_typ_2 | 400 | 423 | 380.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 544 | 567 | 150.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 681 | 964 | 2.3E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 136 | 159 | 4.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 86 | 110 | 37.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 496 | 520 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 233 | 257 | 58.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 160 | 184 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 209 | 232 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 424 | 448 | 120.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 233 | 262 | 18.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 496 | 525 | 2.2 | - |
| SMART | SM00365 | LRR_sd22_2 | 136 | 168 | 250.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 681 | 964 | 37.064308 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 811 | 823 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 687 | 709 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28490.1 | Leucine-rich receptor-like protein kinase family protein. member of Receptor kinase-like protein family | 0 |
| RefSeq | XP_013696490.2 | receptor-like protein kinase 5 [Brassica napus] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A565AV65 | Protein kinase domain-containing protein OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS2974 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology