Basic Information
Locus ID:
Sp7g25940.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
ATP binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-5 | 50659 | 54619 | + | Sp7g25940.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 92,620.06 Da | 51.15 | 84.00 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 553 | 686 | 9.39132E-24 | - |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 555 | 685 | 4.3E-38 | IPR003959 |
| Pfam | PF17862 | AAA+ lid domain | 707 | 745 | 1.8E-10 | IPR041569 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 515 | 754 | 1.14E-57 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 687 | 759 | 3.1E-94 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 514 | 686 | 3.1E-94 | IPR027417 |
| SMART | SM00382 | AAA_5 | 551 | 688 | 5.6E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 658 | 677 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 748 | 773 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 449 | 491 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28000.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_024005614.1 | uncharacterized protein LOC18028850 isoform X2 [Eutrema salsugineum] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | A0A565CPW5 | AAA domain-containing protein OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS26199 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology