Basic Information
Locus ID:
Sp7g22160.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Endoplasmin homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-4 | 6580630 | 6585001 | - | Sp7g22160.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.92 | 94,119.70 Da | 37.43 | 80.62 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 86 | 276 | 1.1141E-97 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 100 | 255 | 7.8E-13 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 258 | 796 | 1.1E-218 | IPR001404 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 77 | 286 | 2.33E-69 | IPR036890 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 344 | 624 | 2.65E-90 | IPR020568 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 643 | 765 | 1.57E-33 | IPR037196 |
| Gene3D | G3DSA:3.40.50.11260 | - | 537 | 624 | 2.2E-36 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 64 | 300 | 3.8E-91 | IPR036890 |
| Gene3D | G3DSA:1.20.120.790 | - | 632 | 777 | 1.5E-56 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 343 | 536 | 1.4E-73 | - |
| SMART | SM00387 | HKATPase_4 | 99 | 256 | 5.1E-8 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 53 | 803 | 3.8E-257 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 97 | 106 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 192 | 214 | 3.3E-71 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 98 | 120 | 3.3E-71 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 149 | 166 | 3.3E-71 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 77 | 97 | 3.3E-71 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 244 | 261 | 3.3E-71 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 262 | 280 | 3.3E-71 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 167 | 184 | 3.3E-71 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 74 | 767 | 26.382326 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 774 | 821 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 486 | 505 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 779 | 793 | - | - |
| Coils | Coil | Coil | 310 | 330 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24190.1 | Chaperone protein htpG family protein. encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues. | 0 |
| RefSeq | XP_006413464.1 | endoplasmin homolog [Eutrema salsugineum] | 0 |
| Q9STX5 | Endoplasmin homolog OS=Arabidopsis thaliana OX=3702 GN=HSP90-7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1J3EUP9 | Endoplasmin-like protein OS=Noccaea caerulescens OX=107243 GN=LC_TR15881_c0_g1_i1_g.54616 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology