Basic Information
Locus ID:
Sp7g21130.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
PAS domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-4 | 6103463 | 6107160 | + | Sp7g21130.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 81,456.60 Da | 48.61 | 70.17 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 466 | 712 | 9.22247E-121 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 460 | 711 | 2.5E-64 | IPR001245 |
| Pfam | PF00989 | PAS fold | 82 | 186 | 1.1E-8 | IPR013767 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 432 | 710 | 7.55E-80 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 81 | 192 | 2.62E-15 | IPR035965 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 539 | 723 | 7.4E-60 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 78 | 212 | 3.9E-18 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 453 | 537 | 3.1E-26 | - |
| SMART | SM00220 | serkin_6 | 460 | 716 | 7.5E-58 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 81 | 192 | 4.9E-10 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 78 | 150 | 10.039033 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 460 | 716 | 43.099525 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 579 | 591 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 466 | 487 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 620 | 630 | 3.0E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 573 | 591 | 3.0E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 683 | 705 | 3.0E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 534 | 547 | 3.0E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 639 | 661 | 3.0E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 325 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23050.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_013737591.1 | proline-rich receptor-like protein kinase PERK5 [Brassica napus] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1J3E7R4 | Serine/threonine-protein kinase EDR1 (Fragment) OS=Noccaea caerulescens OX=107243 GN=GA_TR20125_c0_g1_i1_g.67263 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology