Basic Information
Locus ID:
Sp7g20740.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-4 | 5943143 | 5945580 | + | Sp7g20740.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 75,519.71 Da | 38.43 | 98.09 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 141 | 200 | 2.1E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 65 | 3.8E-8 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 418 | 677 | 1.2E-33 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 214 | 235 | 0.73 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 235 | 1.56E-40 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 390 | 679 | 6.35E-52 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 380 | 491 | 2.6E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 137 | 2.8E-27 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 493 | 686 | 4.5E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 138 | 259 | 3.1E-30 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 413 | 686 | 27.283579 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22730.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_018447545.1 | PREDICTED: somatic embryogenesis receptor kinase 4 [Raphanus sativus] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T1YJZ5 | Leucine-rich repeat OS=Arabidopsis suecica OX=45249 GN=ISN44_As12g018850 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology