Basic Information
Locus ID:
Sp7g20280.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-4 | 5770425 | 5774188 | + | Sp7g20280.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 77,761.41 Da | 38.93 | 92.30 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 415 | 686 | 1.9585E-88 | - |
| Pfam | PF00069 | Protein kinase domain | 410 | 682 | 3.2E-44 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 108 | 122 | 1.5 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 42 | 81 | 5.2E-10 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 387 | 683 | 1.66E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 38 | 251 | 3.94E-39 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 487 | 710 | 3.3E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 371 | 486 | 5.2E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 269 | 2.9E-46 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 409 | 686 | 37.99715 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 278 | 296 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 357 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 296 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 364 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_006413689.1 | protein STRUBBELIG-RECEPTOR FAMILY 8 [Eutrema salsugineum] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | V4MIH0 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10024563mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology