Basic Information
Locus ID:
Sp7g20050.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Proteinaceous RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-4 | 5658185 | 5661866 | - | Sp7g20050.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.22 | 64,472.00 Da | 39.91 | 88.58 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18671 | PIN_PRORP-Zc3h12a-like | 402 | 528 | 3.48727E-62 | - |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 83 | 294 | 2.2E-82 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 339 | 573 | 1.1E-60 | IPR031595 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 91 | 574 | 6.3E-221 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 355 | 539 | 6.3E-221 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 93 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 90 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21900.1 | proteinaceous RNase P 3. | 0 |
| RefSeq | XP_013642952.2 | proteinaceous RNase P 3-like isoform X1 [Brassica napus] | 0 |
| F4JKB6 | Proteinaceous RNase P 3 OS=Arabidopsis thaliana OX=3702 GN=PRORP3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7TEJ5 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_092009 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology