Basic Information
Locus ID:
Sp7g18630.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-4 | 5113846 | 5116488 | + | Sp7g18630.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.08 | 93,669.72 Da | 31.74 | 103.25 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 148 | 170 | 0.16 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 100 | 122 | 0.79 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 564 | 833 | 1.2E-45 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 319 | 341 | 1.4 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 342 | 402 | 4.0E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 51 | 72 | 0.58 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 553 | 835 | 4.92E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 2 | 308 | 1.77E-57 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 221 | 478 | 3.17E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 640 | 843 | 1.7E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 239 | 483 | 1.1E-62 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 238 | 9.0E-74 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 530 | 639 | 5.3E-23 | - |
| SMART | SM00369 | LRR_typ_2 | 98 | 122 | 71.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 218 | 97.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 146 | 170 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 317 | 340 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 341 | 365 | 140.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 562 | 844 | 5.0E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 562 | 844 | 36.908833 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 684 | 696 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 317 | 330 | 5.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 221 | 234 | 5.9E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G20270.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. | 0 |
| RefSeq | XP_006413888.1 | leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 [Eutrema salsugineum] | 0 |
| O65440 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 OS=Arabidopsis thaliana OX=3702 GN=BAM3 PE=1 SV=3 | 0 | |
| TrEMBL | M4DWN4 | Protein kinase domain-containing protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology