Basic Information
Locus ID:
Sp7g14470.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-4 | 3295028 | 3295582 | + | Sp7g14470.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 20,403.18 Da | 50.39 | 89.56 | 0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 103 | 146 | 2.25575E-16 | - |
| Pfam | PF13639 | Ring finger domain | 103 | 146 | 3.8E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 103 | 152 | 8.01E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 69 | 151 | 3.0E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 104 | 145 | 1.3E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 104 | 146 | 12.754832 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G15975.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_018450349.1 | PREDICTED: LOW QUALITY PROTEIN: RING-H2 finger protein ATL17-like [Raphanus sativus] | 0 |
| Q8LF65 | RING-H2 finger protein ATL17 OS=Arabidopsis thaliana OX=3702 GN=ATL17 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6D2LBM2 | RING-type E3 ubiquitin transferase OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS44618 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology