Basic Information
Locus ID:
Sp7g12910.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Contains the following InterPro domains Protein kinase, catalytic domain (InterPro IPR000719), Serine-threonine tyrosine-protein kinase (InterPro IPR001245), Serine threonine protein kinase-like, ATMRK (InterPro IPR015783), Protein kinase-like domain (InterPro IPR011009), Serine threonine-protein kinase, active site (InterPro IPR008271)
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-4 | 2596666 | 2598190 | + | Sp7g12910.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.52 | 40,864.48 Da | 41.25 | 81.02 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 68 | 332 | 3.63342E-113 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 62 | 332 | 2.8E-60 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 44 | 332 | 5.19E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 50 | 139 | 4.2E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 160 | 343 | 1.0E-58 | - |
| SMART | SM00220 | serkin_6 | 62 | 332 | 1.3E-60 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 62 | 335 | 41.530651 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 199 | 211 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 303 | 325 | 3.7E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 155 | 168 | 3.7E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 259 | 281 | 3.7E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 193 | 211 | 3.7E-15 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14780.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_018444511.1 | PREDICTED: serine/threonine-protein kinase HT1-like [Raphanus sativus] | 0 |
| Q9FGB1 | Serine/threonine-protein kinase 52 OS=Arabidopsis thaliana OX=3702 GN=CBC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A078F958 | BnaA05g13210D protein OS=Brassica napus OX=3708 GN=BnaA05g13210D PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology