Basic Information
Locus ID:
Sp7g10650.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
G-quadruplex DNA unwinding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-4 | 1243603 | 1247512 | - | Sp7g10650.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 81,352.84 Da | 54.32 | 61.99 | -0.93 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50249 | Nucleic acid-binding proteins | 15 | 130 | 6.68E-6 | IPR012340 |
| Gene3D | G3DSA:2.40.50.140 | - | 11 | 141 | 2.6E-15 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 441 | 491 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 198 | 217 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 450 | 487 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 198 | 271 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 262 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G30739.1 | - | 0 |
| RefSeq | XP_024015288.1 | uncharacterized protein LOC112088945 isoform X3 [Eutrema salsugineum] | 0 |
| TrEMBL | A0A8T2BSF5 | Retrotrans_gag domain-containing protein OS=Arabidopsis thaliana x Arabidopsis arenosa OX=1240361 GN=ISN45_Aa02g018210 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Schrenkiella parvula | 26 | Sp1g30460.v2.2, Sp1g31270.v2.2, Sp1g31830.v2.2 ... |