Basic Information
Locus ID:
Sp7g08470.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Major Facilitator Superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-3 | 423565 | 432138 | - | Sp7g08470.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.28 | 48,148.29 Da | 40.76 | 101.32 | 0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 13 | 425 | 1.60216E-58 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 13 | 385 | 2.9E-26 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 13 | 426 | 1.01E-34 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 10 | 428 | 7.2E-36 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 9 | 431 | 10.399158 | IPR020846 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 309 | 330 | 4.6E-6 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 59 | 75 | 4.6E-6 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 369 | 392 | 4.6E-6 | IPR001958 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_018433236.1 | PREDICTED: hippocampus abundant transcript-like protein 1 isoform X3 [Raphanus sativus] | 0 |
| TrEMBL | A0A6J0JDY3 | hippocampus abundant transcript-like protein 1 isoform X3 OS=Raphanus sativus OX=3726 GN=LOC108805791 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology