Basic Information
Locus ID:
Sp7g07060.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-2 | 1154151 | 1157041 | + | Sp7g07060.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.30 | 80,841.68 Da | 56.26 | 80.62 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 12 | 149 | 2.40966E-54 | - |
| CDD | cd14066 | STKc_IRAK | 412 | 672 | 3.67662E-85 | - |
| Pfam | PF00582 | Universal stress protein family | 12 | 139 | 1.3E-13 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 408 | 660 | 2.8E-41 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 12 | 146 | 6.45E-12 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 384 | 665 | 2.7E-70 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 479 | 681 | 2.0E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 374 | 478 | 2.8E-25 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 10 | 146 | 2.8E-12 | IPR014729 |
| SMART | SM00220 | serkin_6 | 406 | 669 | 8.5E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 406 | 669 | 36.145599 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 524 | 536 | - | IPR008271 |
| Coils | Coil | Coil | 308 | 339 | - | - |
| Coils | Coil | Coil | 360 | 380 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35380.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_009124445.1 | U-box domain-containing protein 35 [Brassica rapa] | 0 |
| Q8S8S7 | U-box domain-containing protein 34 OS=Arabidopsis thaliana OX=3702 GN=PUB34 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8D9MDZ0 | (field mustard) hypothetical protein OS=Brassica campestris OX=3711 GN=BRAPAZ1V2_A04P10460.2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology