Basic Information
Locus ID:
Sp7g07050.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Short Name:
PRK1
Description:
LRR receptor-like serine threonine-protein kinase RLK
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-2 | 1151199 | 1153274 | - | Sp7g07050.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.95 | 71,877.19 Da | 36.86 | 94.94 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 179 | 200 | 1.5 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 343 | 608 | 1.3E-29 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 20 | 58 | 1.8E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 109 | 169 | 1.4E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 20 | 201 | 5.53E-31 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 343 | 613 | 1.88E-48 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 303 | 414 | 3.2E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 179 | 224 | 5.8E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 19 | 178 | 5.4E-37 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 416 | 632 | 5.3E-38 | - |
| SMART | SM00369 | LRR_typ_2 | 179 | 200 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 156 | 178 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 107 | 131 | 0.11 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 339 | 624 | 26.760622 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 621 | 646 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 628 | 646 | - | - |
| Coils | Coil | Coil | 596 | 616 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35390.1 | Leucine-rich repeat protein kinase family protein. Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. | 0 |
| RefSeq | XP_006403084.2 | LOW QUALITY PROTEIN: pollen receptor-like kinase 1 [Eutrema salsugineum] | 0 |
| C0LGU0 | Pollen receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8S9MQA6 | Protein kinase domain-containing protein OS=Brassica cretica OX=69181 GN=F2Q68_00039670 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology