Basic Information
Locus ID:
Sp7g06200.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-2 | 549266 | 553132 | + | Sp7g06200.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.61 | 47,163.88 Da | 48.86 | 92.13 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 118 | 323 | 3.4E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 94 | 381 | 8.09E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 193 | 394 | 2.1E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 89 | 190 | 5.0E-25 | - |
| SMART | SM00220 | serkin_6 | 116 | 380 | 8.4E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 116 | 399 | 35.410629 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 122 | 144 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 235 | 247 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35960.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_013634937.1 | PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 [Brassica oleracea var. oleracea] | 0 |
| Q8RXC8 | Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Arabidopsis thaliana OX=3702 GN=RBK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A078HIZ5 | (rape) hypothetical protein OS=Brassica napus OX=3708 GN=BnaC04g29830D PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology