Basic Information
Locus ID:
Sp7g04960.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
DnaJ molecular chaperone homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-1 | 2284473 | 2287120 | + | Sp7g04960.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.89 | 45,254.65 Da | 35.60 | 54.49 | -0.89 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 66 | 119 | 3.85871E-16 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 66 | 127 | 5.9E-19 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 60 | 129 | 1.7E-19 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 54 | 147 | 6.1E-20 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 65 | 122 | 1.4E-15 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 66 | 130 | 16.629852 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 86 | 101 | 3.2E-10 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 68 | 86 | 3.2E-10 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 102 | 122 | 3.2E-10 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 201 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 373 | 390 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 358 | 405 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 311 | 344 | - | - |
| Coils | Coil | Coil | 304 | 328 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37380.1 | Chaperone DnaJ-domain superfamily protein. | 0 |
| RefSeq | XP_010440846.1 | PREDICTED: uncharacterized protein LOC104724098 [Camelina sativa] | 0 |
| Q8TQR1 | Chaperone protein DnaJ OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) OX=188937 GN=dnaJ PE=3 SV=1 | 0 | |
| TrEMBL | A0A565C4C8 | J domain-containing protein OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS18914 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology