Basic Information
Locus ID:
Sp7g01700.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-1 | 672108 | 673214 | - | Sp7g01700.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 41,427.63 Da | 57.27 | 79.46 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 135 | 178 | 2.4931E-19 | - |
| Pfam | PF13639 | Ring finger domain | 135 | 178 | 6.3E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 114 | 184 | 2.07E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 95 | 183 | 2.7E-23 | IPR013083 |
| SMART | SM00184 | ring_2 | 136 | 177 | 7.3E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 136 | 178 | 12.563043 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 317 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 303 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40250.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_024014785.1 | RING-H2 finger protein ATL46 [Eutrema salsugineum] | 0 |
| Q9FL07 | RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1 | 0 | |
| TrEMBL | V4L981 | RING-type domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10028349mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology