Basic Information
Locus ID:
Sp7g00610.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch7-1 | 238167 | 239546 | + | Sp7g00610.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 50,350.93 Da | 53.08 | 85.73 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18316 | BTB_POZ_KCTD-like | 13 | 87 | 4.17075E-18 | - |
| Pfam | PF02214 | BTB/POZ domain | 13 | 96 | 4.9E-12 | IPR003131 |
| SUPERFAMILY | SSF54695 | POZ domain | 11 | 95 | 1.93E-15 | IPR011333 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 137 | 451 | 2.84E-9 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 134 | 457 | 8.1E-7 | IPR015943 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 5 | 107 | 2.8E-17 | IPR011333 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41330.1 | BTB/POZ domain with WD40/YVTN repeat-like protein. | 0 |
| RefSeq | XP_024014637.1 | LOW QUALITY PROTEIN: BTB/POZ domain-containing protein At5g41330 [Eutrema salsugineum] | 0 |
| Q9FN67 | BTB/POZ domain-containing protein At5g41330 OS=Arabidopsis thaliana OX=3702 GN=At5g41330 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1J3DSF2 | BTB/POZ domain-containing protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=GA_TR19034_c0_g1_i1_g.61132 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology