Basic Information
Locus ID:
Sp6g41190.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch6-6 | 11222073 | 11228081 | - | Sp6g41190.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.69 | 132,108.77 Da | 39.23 | 91.90 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 644 | 910 | 1.39428E-87 | - |
| Pfam | PF01873 | Domain found in IF2B/IF5 | 1060 | 1169 | 3.1E-26 | IPR002735 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 68 | 3.7E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 640 | 905 | 5.9E-45 | IPR000719 |
| SUPERFAMILY | SSF100966 | Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 1042 | 1144 | 1.09E-16 | IPR016189 |
| SUPERFAMILY | SSF75689 | Zinc-binding domain of translation initiation factor 2 beta | 1141 | 1175 | 1.2E-6 | IPR016190 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 347 | 1.29E-49 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 611 | 908 | 1.45E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 714 | 925 | 1.9E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 302 | 422 | 5.2E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 189 | 301 | 1.3E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 188 | 1.6E-36 | IPR032675 |
| Gene3D | G3DSA:3.30.30.170 | - | 1033 | 1176 | 2.3E-32 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 599 | 713 | 2.1E-35 | - |
| SMART | SM00220 | serkin_6 | 638 | 910 | 3.7E-39 | IPR000719 |
| SMART | SM00653 | eIF2Bneu4 | 1062 | 1171 | 5.2E-39 | IPR002735 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 638 | 911 | 38.873459 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 644 | 666 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 758 | 770 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_024011824.1 | LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Eutrema salsugineum] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1J3EL59 | Putative LRR receptor-like serine/threonine-protein kinase OS=Noccaea caerulescens OX=107243 GN=LC_TR12636_c0_g1_i1_g.44214 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology