Basic Information
Locus ID:
Sp6g41090.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch6-6 | 11193541 | 11195625 | + | Sp6g41090.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.04 | 38,031.83 Da | 47.56 | 91.48 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 26 | 281 | 2.34901E-118 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 22 | 281 | 2.4E-58 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 20 | 308 | 9.85E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 103 | 290 | 5.4E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 8 | 99 | 1.0E-21 | - |
| SMART | SM00220 | serkin_6 | 20 | 285 | 6.8E-73 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 20 | 285 | 45.728451 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 26 | 47 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 140 | 152 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 96 | 109 | 1.9E-9 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 208 | 230 | 1.9E-9 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 252 | 274 | 1.9E-9 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 134 | 152 | 1.9E-9 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01850.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_009125392.1 | serine/threonine-protein kinase STY13 isoform X1 [Brassica rapa] | 0 |
| Q9ZQ31 | Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8S9I4J4 | Protein kinase domain-containing protein OS=Brassica cretica OX=69181 GN=F2Q70_00013943 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology