Basic Information
Locus ID:
Sp6g39580.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
lectin protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch6-6 | 10675729 | 10677870 | + | Sp6g39580.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 76,899.34 Da | 38.65 | 87.22 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 378 | 649 | 1.25772E-93 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 51 | 263 | 3.07506E-81 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 36 | 266 | 2.4E-58 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 373 | 576 | 8.5E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 348 | 649 | 2.16E-80 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 35 | 267 | 5.6E-60 | IPR013320 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 448 | 670 | 3.2E-61 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 33 | 270 | 5.7E-66 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 334 | 447 | 9.6E-32 | - |
| SMART | SM00220 | serkin_6 | 372 | 650 | 2.6E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 372 | 655 | 38.138493 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 378 | 401 | - | IPR017441 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 146 | 152 | - | IPR019825 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 491 | 503 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 283 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03140.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_006398761.2 | L-type lectin-domain containing receptor kinase VIII.2 [Eutrema salsugineum] | 0 |
| Q9LYX1 | L-type lectin-domain containing receptor kinase VIII.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK82 PE=2 SV=1 | 0 | |
| TrEMBL | V4L991 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10015744mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology